Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.45■■□□□ 1.18
CLIC4Q9Y696 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLIC4Q9Y696 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 SLC29A4P1-201ENST00000398760 971 ntBASIC22.44■■□□□ 1.18
CLIC4Q9Y696 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 AC073210.2-201ENST00000430369 194 ntBASIC22.44■■□□□ 1.18
CLIC4Q9Y696 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.44■■□□□ 1.18
CLIC4Q9Y696 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLIC4Q9Y696 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AL390719.1-204ENST00000412397 1219 ntBASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AL138781.1-201ENST00000566567 1274 ntBASIC22.43■■□□□ 1.18
CLIC4Q9Y696 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 MYC-209ENST00000641252 345 ntBASIC22.43■■□□□ 1.18
CLIC4Q9Y696 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLIC4Q9Y696 BX323043.1-201ENST00000641006 1765 ntBASIC22.43■■□□□ 1.18
CLIC4Q9Y696 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.42■■□□□ 1.18
CLIC4Q9Y696 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms