Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 PHGDH-210ENST00000641115 1638 ntBASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 KRASP1-201ENST00000407852 552 ntBASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB9Q9Y5E1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 PRKY-204ENST00000533551 1019 ntBASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 AL121906.2-201ENST00000621597 723 ntBASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB9Q9Y5E1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 AL121829.2-201ENST00000620908 328 ntBASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
PCDHB9Q9Y5E1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 TCF3P1-201ENST00000423021 1937 ntBASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 AC097493.4-201ENST00000641197 219 ntBASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 AC018553.1-201ENST00000616682 1458 ntBASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB9Q9Y5E1 AC116351.2-201ENST00000606540 1585 ntBASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 RCN1P1-201ENST00000400413 996 ntBASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHB9Q9Y5E1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms