Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 AL353719.1-201ENST00000566847 864 ntBASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RTCBQ9Y3I0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 Z85996.1-201ENST00000494644 937 ntBASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 AC093458.2-201ENST00000623150 629 ntBASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTCBQ9Y3I0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 DUSP5P1-201ENST00000441325 1139 ntBASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.89■■□□□ 1.58
RTCBQ9Y3I0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTCBQ9Y3I0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.89■■□□□ 1.57
RTCBQ9Y3I0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTCBQ9Y3I0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.57
RTCBQ9Y3I0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 FEM1AP4-201ENST00000443167 1987 ntBASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 AL671277.2-201ENST00000458060 996 ntBASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTCBQ9Y3I0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 AL359075.1-203ENST00000462729 1002 ntBASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 AC140113.3-201ENST00000605663 199 ntBASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
RTCBQ9Y3I0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms