Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 AC091799.1-201ENST00000422823 811 ntBASIC18.47■□□□□ 0.55
RNF6Q9Y252 AC026366.1-201ENST00000488803 879 ntBASIC18.47■□□□□ 0.55
RNF6Q9Y252 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 KRT17P1-201ENST00000399211 1546 ntBASIC18.47■□□□□ 0.55
RNF6Q9Y252 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF6Q9Y252 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF6Q9Y252 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 AC245052.3-201ENST00000450182 901 ntBASIC18.46■□□□□ 0.55
RNF6Q9Y252 CDV3P1-201ENST00000471403 739 ntBASIC18.46■□□□□ 0.55
RNF6Q9Y252 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 FAM21FP-204ENST00000608637 956 ntBASIC18.46■□□□□ 0.55
RNF6Q9Y252 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF6Q9Y252 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF6Q9Y252 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF6Q9Y252 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 AP003097.1-201ENST00000530657 1135 ntBASIC18.45■□□□□ 0.54
RNF6Q9Y252 MIR2861-201ENST00000636310 90 ntBASIC18.45■□□□□ 0.54
RNF6Q9Y252 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF6Q9Y252 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF6Q9Y252 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF6Q9Y252 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF6Q9Y252 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF6Q9Y252 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF6Q9Y252 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF6Q9Y252 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms