Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 TMEM179-206ENST00000616017 1645 ntBASIC25.76■■□□□ 1.71
SPG7Q9UQ90 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SPG7Q9UQ90 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 WWOX-216ENST00000569818 525 ntBASIC25.75■■□□□ 1.71
SPG7Q9UQ90 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SPG7Q9UQ90 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.74■■□□□ 1.71
SPG7Q9UQ90 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 AC096733.2-201ENST00000609937 1394 ntBASIC25.73■■□□□ 1.71
SPG7Q9UQ90 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 FAM207BP-201ENST00000447172 505 ntBASIC25.73■■□□□ 1.71
SPG7Q9UQ90 AC087388.1-201ENST00000571370 1112 ntBASIC25.73■■□□□ 1.71
SPG7Q9UQ90 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SPG7Q9UQ90 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.72■■□□□ 1.71
SPG7Q9UQ90 MFAP1P1-201ENST00000442257 1255 ntBASIC25.72■■□□□ 1.71
SPG7Q9UQ90 BX664615.1-201ENST00000443558 458 ntBASIC25.72■■□□□ 1.71
SPG7Q9UQ90 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.72■■□□□ 1.71
SPG7Q9UQ90 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 HMGA1P5-201ENST00000412453 271 ntBASIC25.71■■□□□ 1.71
SPG7Q9UQ90 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SPG7Q9UQ90 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms