Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 MIR6752-201ENST00000618442 71 ntBASIC8.15□□□□□ -1.1
MACF1Q9UPN3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 AC137767.1-201ENST00000602918 1920 ntBASIC8.15□□□□□ -1.1
MACF1Q9UPN3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
MACF1Q9UPN3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC8.15□□□□□ -1.11
MACF1Q9UPN3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
MACF1Q9UPN3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 SEC1P-202ENST00000473944 940 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AC027601.4-201ENST00000611259 610 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 MIR4745-201ENST00000577608 62 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AL121672.3-201ENST00000608644 468 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AL356652.1-201ENST00000615962 565 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AC009065.1-201ENST00000564055 1225 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AL008721.1-201ENST00000609964 604 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AL162741.1-201ENST00000565563 1558 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 COPE-202ENST00000349893 948 ntTSL 2 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 BCRP1-201ENST00000444246 691 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 KRT8P26-201ENST00000534154 1276 ntBASIC8.14□□□□□ -1.11
MACF1Q9UPN3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
MACF1Q9UPN3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 SAPCD2P3-201ENST00000455031 850 ntBASIC8.13□□□□□ -1.11
MACF1Q9UPN3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MACF1Q9UPN3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC8.13□□□□□ -1.11
MACF1Q9UPN3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms