Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 MIR4785-201ENST00000585005 73 ntBASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AL121829.2-201ENST00000620908 328 ntBASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AC113410.3-201ENST00000623366 203 ntBASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA1Q9UND3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
NPIPA1Q9UND3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.14■□□□□ 0.5
NPIPA1Q9UND3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NPIPA1Q9UND3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.5
NPIPA1Q9UND3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.14■□□□□ 0.5
NPIPA1Q9UND3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 BX088651.1-201ENST00000540551 451 ntBASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA1Q9UND3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA1Q9UND3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms