Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA4Q9UN74 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHA4Q9UN74 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 PRORSD1P-201ENST00000295112 541 ntBASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 AC239809.2-201ENST00000415381 517 ntBASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 NBPF21P-201ENST00000425093 1451 ntBASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA4Q9UN74 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 TREX1-205ENST00000625293 1783 ntBASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 KRASP1-201ENST00000407852 552 ntBASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 AC124016.1-201ENST00000609552 612 ntBASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA4Q9UN74 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 AC133681.1-201ENST00000465482 601 ntBASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA4Q9UN74 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 KRT18P16-201ENST00000510337 1294 ntBASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 C1QBPP2-201ENST00000528754 825 ntBASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHA4Q9UN74 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA4Q9UN74 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms