Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 AL162377.1-201ENST00000618844 1793 ntBASIC18.53■□□□□ 0.56
CTSFQ9UBX1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.52■□□□□ 0.56
CTSFQ9UBX1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 AL353708.3-201ENST00000610272 989 ntBASIC18.52■□□□□ 0.56
CTSFQ9UBX1 AC026471.5-201ENST00000615068 467 ntBASIC18.52■□□□□ 0.56
CTSFQ9UBX1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.52■□□□□ 0.56
CTSFQ9UBX1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTSFQ9UBX1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTSFQ9UBX1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTSFQ9UBX1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTSFQ9UBX1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTSFQ9UBX1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.52■□□□□ 0.55
CTSFQ9UBX1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 C1QL1P1-201ENST00000568105 661 ntBASIC18.51■□□□□ 0.55
CTSFQ9UBX1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTSFQ9UBX1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 LINC01006-201ENST00000333319 2292 ntBASIC18.5■□□□□ 0.55
CTSFQ9UBX1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 NIFKP9-201ENST00000419265 221 ntBASIC18.5■□□□□ 0.55
CTSFQ9UBX1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 KRT18P16-201ENST00000510337 1294 ntBASIC18.5■□□□□ 0.55
CTSFQ9UBX1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 AL355075.4-201ENST00000554988 638 ntBASIC18.5■□□□□ 0.55
CTSFQ9UBX1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 AP003071.4-201ENST00000562276 1284 ntBASIC18.5■□□□□ 0.55
CTSFQ9UBX1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.5■□□□□ 0.55
CTSFQ9UBX1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 AL691432.2-201ENST00000607222 2038 ntBASIC18.49■□□□□ 0.55
CTSFQ9UBX1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms