Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF7Q9UBF6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.59■□□□□ 0.25
RNF7Q9UBF6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 AC239809.2-201ENST00000415381 517 ntBASIC16.59■□□□□ 0.25
RNF7Q9UBF6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 AL023875.1-201ENST00000640777 796 ntBASIC16.59■□□□□ 0.25
RNF7Q9UBF6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF7Q9UBF6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RNF7Q9UBF6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF7Q9UBF6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RNF7Q9UBF6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 C1QBPP2-201ENST00000528754 825 ntBASIC16.58■□□□□ 0.24
RNF7Q9UBF6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 TMEM191A-211ENST00000637163 1067 ntBASIC16.58■□□□□ 0.24
RNF7Q9UBF6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 AC073130.3-201ENST00000624389 2278 ntBASIC16.58■□□□□ 0.24
RNF7Q9UBF6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RNF7Q9UBF6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 PCDHAC2-203ENST00000615316 3011 ntBASIC16.57■□□□□ 0.24
RNF7Q9UBF6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 NBPF21P-201ENST00000425093 1451 ntBASIC16.57■□□□□ 0.24
RNF7Q9UBF6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNF7Q9UBF6 KRASP1-201ENST00000407852 552 ntBASIC16.57■□□□□ 0.24
RNF7Q9UBF6 YBX1P10-201ENST00000444752 975 ntBASIC16.57■□□□□ 0.24
RNF7Q9UBF6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms