Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 AC026366.1-201ENST00000488803 879 ntBASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 AP003097.1-201ENST00000530657 1135 ntBASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NECTIN3Q9NQS3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 AL390719.1-204ENST00000412397 1219 ntBASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NECTIN3Q9NQS3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 FAM201B-201ENST00000458407 597 ntBASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 AL162377.1-201ENST00000618844 1793 ntBASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
NECTIN3Q9NQS3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 AL031963.3-201ENST00000606441 850 ntBASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 KRT8P17-201ENST00000453110 1448 ntBASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN3Q9NQS3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms