Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 AC099778.1-201ENST00000568593 1911 ntBASIC16.79■□□□□ 0.28
GCM1Q9NP62 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 AC233263.1-201ENST00000578059 224 ntBASIC16.79■□□□□ 0.28
GCM1Q9NP62 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 TMEM191A-211ENST00000637163 1067 ntBASIC16.79■□□□□ 0.28
GCM1Q9NP62 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 AC090340.1-201ENST00000620778 4980 ntBASIC16.78■□□□□ 0.28
GCM1Q9NP62 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GCM1Q9NP62 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GCM1Q9NP62 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 PRORSD1P-201ENST00000295112 541 ntBASIC16.77■□□□□ 0.28
GCM1Q9NP62 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GCM1Q9NP62 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 AL121829.2-201ENST00000620908 328 ntBASIC16.77■□□□□ 0.28
GCM1Q9NP62 AL121906.2-201ENST00000621597 723 ntBASIC16.77■□□□□ 0.28
GCM1Q9NP62 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
GCM1Q9NP62 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.77■□□□□ 0.27
GCM1Q9NP62 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.77■□□□□ 0.27
GCM1Q9NP62 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.77■□□□□ 0.27
GCM1Q9NP62 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GCM1Q9NP62 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
GCM1Q9NP62 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GCM1Q9NP62 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GCM1Q9NP62 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 MTDHP1-201ENST00000605323 784 ntBASIC16.76■□□□□ 0.27
GCM1Q9NP62 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 PHGDH-210ENST00000641115 1638 ntBASIC16.76■□□□□ 0.27
GCM1Q9NP62 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.76■□□□□ 0.27
GCM1Q9NP62 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms