Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB1BQ9H0U4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 UNC93B2-201ENST00000285383 730 ntBASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 KRT18P16-201ENST00000510337 1294 ntBASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 C1QL1P1-201ENST00000568105 661 ntBASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB1BQ9H0U4 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 MMP23A-201ENST00000234610 1017 ntBASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 AC133561.5-201ENST00000635547 218 ntBASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 AL031985.4-201ENST00000642138 673 ntBASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
RAB1BQ9H0U4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.64■□□□□ 0.26
RAB1BQ9H0U4 AC020907.5-201ENST00000624372 1936 ntBASIC16.64■□□□□ 0.26
RAB1BQ9H0U4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RAB1BQ9H0U4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 BX119927.1-201ENST00000636596 1552 ntBASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 AC087499.1-201ENST00000418141 1075 ntBASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1BQ9H0U4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 TSPY15P-201ENST00000457163 923 ntBASIC16.63■□□□□ 0.25
RAB1BQ9H0U4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms