Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC007225.1-201ENST00000566331 1836 ntBASIC10.26□□□□□ -0.77
KRTAP4-1Q9BYQ7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 LINC01465-201ENST00000408887 1940 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 SMG8-203ENST00000578922 2178 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 BID-212ENST00000614949 1988 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC009947.2-201ENST00000444014 672 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAM207BP-201ENST00000447172 505 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 KRT126P-201ENST00000549467 1181 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AL441883.1-201ENST00000566170 1045 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC141257.4-201ENST00000634557 245 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC136944.6-201ENST00000634818 245 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC006128.1-201ENST00000624704 1661 ntBASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP4-1Q9BYQ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 PCED1CP-201ENST00000419887 785 ntBASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 COX11P1-201ENST00000489116 835 ntBASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AL023973.1-201ENST00000624619 620 ntBASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AP000550.4-202ENST00000639755 178 ntBASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 AC116562.4-202ENST00000641738 218 ntBASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 PHGDH-210ENST00000641115 1638 ntBASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP4-1Q9BYQ7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 TMEM179-206ENST00000616017 1645 ntBASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
KRTAP4-1Q9BYQ7 AL359075.1-203ENST00000462729 1002 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms