Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.62■■□□□ 1.69
SHANK3Q9BYB0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SHANK3Q9BYB0 AL023803.3-201ENST00000615559 522 ntBASIC25.62■■□□□ 1.69
SHANK3Q9BYB0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHANK3Q9BYB0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.62■■□□□ 1.69
SHANK3Q9BYB0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 AC091076.1-201ENST00000610741 619 ntBASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SHANK3Q9BYB0 AC092720.2-201ENST00000602388 1665 ntBASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 FAM86EP-206ENST00000510506 987 ntBASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 RNF152P1-201ENST00000397754 604 ntBASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 SLC25A1P2-201ENST00000430693 912 ntBASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.6■■□□□ 1.69
SHANK3Q9BYB0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 KRT18P38-201ENST00000449496 1282 ntBASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 COX11P1-201ENST00000489116 835 ntBASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 KRT126P-201ENST00000549467 1181 ntBASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 AL441883.1-201ENST00000566170 1045 ntBASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SHANK3Q9BYB0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 AL023973.1-201ENST00000624619 620 ntBASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 AL121956.5-201ENST00000625261 221 ntBASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 AC116562.4-202ENST00000641738 218 ntBASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHANK3Q9BYB0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
SHANK3Q9BYB0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SHANK3Q9BYB0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SHANK3Q9BYB0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.58■■□□□ 1.68
SHANK3Q9BYB0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SHANK3Q9BYB0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.57■■□□□ 1.68
SHANK3Q9BYB0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms