Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
FOXC2Q99958 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 AC007663.1-201ENST00000438948 1240 ntBASIC16.59■□□□□ 0.25
FOXC2Q99958 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FOXC2Q99958 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXC2Q99958 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.59■□□□□ 0.25
FOXC2Q99958 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
FOXC2Q99958 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
FOXC2Q99958 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FOXC2Q99958 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FOXC2Q99958 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXC2Q99958 AC096733.2-201ENST00000609937 1394 ntBASIC16.59■□□□□ 0.25
FOXC2Q99958 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
FOXC2Q99958 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXC2Q99958 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 MFAP1P1-201ENST00000442257 1255 ntBASIC16.58■□□□□ 0.24
FOXC2Q99958 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXC2Q99958 AC011298.2-201ENST00000617989 482 ntBASIC16.58■□□□□ 0.24
FOXC2Q99958 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
FOXC2Q99958 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXC2Q99958 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
FOXC2Q99958 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXC2Q99958 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXC2Q99958 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
FOXC2Q99958 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
FOXC2Q99958 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXC2Q99958 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXC2Q99958 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 TSPY17P-201ENST00000450329 467 ntBASIC16.57■□□□□ 0.24
FOXC2Q99958 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.57■□□□□ 0.24
FOXC2Q99958 AC140113.3-201ENST00000605663 199 ntBASIC16.57■□□□□ 0.24
FOXC2Q99958 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXC2Q99958 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 AL024507.2-201ENST00000606070 2574 ntBASIC16.57■□□□□ 0.24
FOXC2Q99958 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FOXC2Q99958 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
FOXC2Q99958 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXC2Q99958 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 RCC2P6-201ENST00000526625 1557 ntBASIC16.56■□□□□ 0.24
FOXC2Q99958 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
FOXC2Q99958 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXC2Q99958 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXC2Q99958 AC092338.2-201ENST00000568827 1415 ntBASIC16.56■□□□□ 0.24
FOXC2Q99958 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXC2Q99958 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 AC004951.3-201ENST00000418645 1148 ntBASIC16.56■□□□□ 0.24
FOXC2Q99958 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
FOXC2Q99958 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.56■□□□□ 0.24
FOXC2Q99958 YBX1P10-201ENST00000444752 975 ntBASIC16.56■□□□□ 0.24
FOXC2Q99958 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXC2Q99958 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXC2Q99958 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXC2Q99958 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FOXC2Q99958 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXC2Q99958 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms