Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 AC116351.2-201ENST00000606540 1585 ntBASIC17.92■□□□□ 0.46
NPAS1Q99742 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 KRT17P3-201ENST00000420566 1262 ntBASIC17.92■□□□□ 0.46
NPAS1Q99742 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS1Q99742 MTDHP1-201ENST00000605323 784 ntBASIC17.92■□□□□ 0.46
NPAS1Q99742 ITM2C-210ENST00000620962 501 ntBASIC17.92■□□□□ 0.46
NPAS1Q99742 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS1Q99742 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NPAS1Q99742 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NPAS1Q99742 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS1Q99742 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS1Q99742 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS1Q99742 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
NPAS1Q99742 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS1Q99742 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.91■□□□□ 0.46
NPAS1Q99742 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS1Q99742 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPAS1Q99742 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 TFP1-202ENST00000475455 1573 ntBASIC17.91■□□□□ 0.46
NPAS1Q99742 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS1Q99742 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NPAS1Q99742 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS1Q99742 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NPAS1Q99742 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS1Q99742 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS1Q99742 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS1Q99742 AC098590.1-201ENST00000468126 897 ntBASIC17.9■□□□□ 0.46
NPAS1Q99742 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NPAS1Q99742 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS1Q99742 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS1Q99742 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS1Q99742 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
NPAS1Q99742 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.89■□□□□ 0.46
NPAS1Q99742 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.89■□□□□ 0.46
NPAS1Q99742 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPAS1Q99742 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
NPAS1Q99742 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 KRT18P29-201ENST00000397031 1267 ntBASIC17.89■□□□□ 0.45
NPAS1Q99742 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NPAS1Q99742 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
NPAS1Q99742 AL023875.1-201ENST00000640777 796 ntBASIC17.89■□□□□ 0.45
NPAS1Q99742 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NPAS1Q99742 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.89■□□□□ 0.45
NPAS1Q99742 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NPAS1Q99742 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS1Q99742 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
NPAS1Q99742 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NPAS1Q99742 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS1Q99742 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS1Q99742 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms