Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BARD1Q99728 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BARD1Q99728 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
BARD1Q99728 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BARD1Q99728 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.78■□□□□ 0.6
BARD1Q99728 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BARD1Q99728 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BARD1Q99728 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.78■□□□□ 0.6
BARD1Q99728 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.78■□□□□ 0.6
BARD1Q99728 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.78■□□□□ 0.6
BARD1Q99728 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.78■□□□□ 0.6
BARD1Q99728 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BARD1Q99728 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BARD1Q99728 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BARD1Q99728 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.77■□□□□ 0.6
BARD1Q99728 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
BARD1Q99728 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.77■□□□□ 0.6
BARD1Q99728 KRT17P3-201ENST00000420566 1262 ntBASIC18.77■□□□□ 0.6
BARD1Q99728 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.77■□□□□ 0.6
BARD1Q99728 AC245052.3-201ENST00000450182 901 ntBASIC18.77■□□□□ 0.6
BARD1Q99728 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.77■□□□□ 0.6
BARD1Q99728 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BARD1Q99728 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.77■□□□□ 0.6
BARD1Q99728 AP000974.1-201ENST00000623909 2387 ntBASIC18.77■□□□□ 0.6
BARD1Q99728 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
BARD1Q99728 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.76■□□□□ 0.59
BARD1Q99728 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
BARD1Q99728 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.76■□□□□ 0.59
BARD1Q99728 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
BARD1Q99728 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
BARD1Q99728 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.76■□□□□ 0.59
BARD1Q99728 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 KRT18P68-201ENST00000392293 1000 ntBASIC18.76■□□□□ 0.59
BARD1Q99728 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.76■□□□□ 0.59
BARD1Q99728 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.76■□□□□ 0.59
BARD1Q99728 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.76■□□□□ 0.59
BARD1Q99728 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.76■□□□□ 0.59
BARD1Q99728 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.76■□□□□ 0.59
BARD1Q99728 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.76■□□□□ 0.59
BARD1Q99728 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BARD1Q99728 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.76■□□□□ 0.59
BARD1Q99728 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BARD1Q99728 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
BARD1Q99728 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
BARD1Q99728 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
BARD1Q99728 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.75■□□□□ 0.59
BARD1Q99728 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.75■□□□□ 0.59
BARD1Q99728 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.75■□□□□ 0.59
BARD1Q99728 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
BARD1Q99728 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BARD1Q99728 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.75■□□□□ 0.59
BARD1Q99728 C1QBPP2-201ENST00000528754 825 ntBASIC18.75■□□□□ 0.59
BARD1Q99728 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.75■□□□□ 0.59
BARD1Q99728 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.75■□□□□ 0.59
BARD1Q99728 Z99916.2-201ENST00000604037 246 ntBASIC18.75■□□□□ 0.59
BARD1Q99728 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms