Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.56■□□□□ 0.88
CDCA3Q99618 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.56■□□□□ 0.88
CDCA3Q99618 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.56■□□□□ 0.88
CDCA3Q99618 AL121894.2-201ENST00000602977 491 ntBASIC20.56■□□□□ 0.88
CDCA3Q99618 AC008622.2-201ENST00000617006 1229 ntBASIC20.56■□□□□ 0.88
CDCA3Q99618 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA3Q99618 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CDCA3Q99618 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDCA3Q99618 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA3Q99618 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA3Q99618 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA3Q99618 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDCA3Q99618 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.55■□□□□ 0.88
CDCA3Q99618 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDCA3Q99618 KRT8P8-201ENST00000434750 1448 ntBASIC20.55■□□□□ 0.88
CDCA3Q99618 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.55■□□□□ 0.88
CDCA3Q99618 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDCA3Q99618 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDCA3Q99618 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.55■□□□□ 0.88
CDCA3Q99618 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.55■□□□□ 0.88
CDCA3Q99618 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.55■□□□□ 0.88
CDCA3Q99618 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.55■□□□□ 0.88
CDCA3Q99618 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDCA3Q99618 TMEM179-206ENST00000616017 1645 ntBASIC20.55■□□□□ 0.88
CDCA3Q99618 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDCA3Q99618 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDCA3Q99618 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDCA3Q99618 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDCA3Q99618 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.54■□□□□ 0.88
CDCA3Q99618 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.54■□□□□ 0.88
CDCA3Q99618 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.54■□□□□ 0.88
CDCA3Q99618 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.54■□□□□ 0.88
CDCA3Q99618 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CDCA3Q99618 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.54■□□□□ 0.88
CDCA3Q99618 FBXW4P1-201ENST00000426721 2239 ntBASIC20.54■□□□□ 0.88
CDCA3Q99618 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDCA3Q99618 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.53■□□□□ 0.88
CDCA3Q99618 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CDCA3Q99618 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA3Q99618 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA3Q99618 AL450487.1-201ENST00000426799 995 ntBASIC20.53■□□□□ 0.88
CDCA3Q99618 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.53■□□□□ 0.88
CDCA3Q99618 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.53■□□□□ 0.88
CDCA3Q99618 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.53■□□□□ 0.88
CDCA3Q99618 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.53■□□□□ 0.88
CDCA3Q99618 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.53■□□□□ 0.88
CDCA3Q99618 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.53■□□□□ 0.88
CDCA3Q99618 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.53■□□□□ 0.88
CDCA3Q99618 AC116407.4-201ENST00000623319 1061 ntBASIC20.53■□□□□ 0.88
CDCA3Q99618 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.53■□□□□ 0.88
CDCA3Q99618 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA3Q99618 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.53■□□□□ 0.88
CDCA3Q99618 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.53■□□□□ 0.88
CDCA3Q99618 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA3Q99618 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA3Q99618 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA3Q99618 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CDCA3Q99618 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.53■□□□□ 0.88
CDCA3Q99618 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.52■□□□□ 0.88
CDCA3Q99618 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDCA3Q99618 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 AP000523.1-201ENST00000398242 1049 ntBASIC20.52■□□□□ 0.88
CDCA3Q99618 DUSP5P1-201ENST00000441325 1139 ntBASIC20.52■□□□□ 0.88
CDCA3Q99618 AL359075.1-203ENST00000462729 1002 ntBASIC20.52■□□□□ 0.88
CDCA3Q99618 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.52■□□□□ 0.88
CDCA3Q99618 AL441883.1-201ENST00000566170 1045 ntBASIC20.52■□□□□ 0.88
CDCA3Q99618 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CDCA3Q99618 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CDCA3Q99618 AC093458.2-201ENST00000623150 629 ntBASIC20.52■□□□□ 0.88
CDCA3Q99618 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA3Q99618 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.52■□□□□ 0.87
CDCA3Q99618 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CDCA3Q99618 AC005332.1-201ENST00000577698 1310 ntBASIC20.52■□□□□ 0.87
CDCA3Q99618 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA3Q99618 AC092720.2-201ENST00000602388 1665 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms