Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H4Q96RI1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 MIR2861-201ENST00000636310 90 ntBASIC18.5■□□□□ 0.55
NR1H4Q96RI1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NR1H4Q96RI1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.49■□□□□ 0.55
NR1H4Q96RI1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 AC067852.2-201ENST00000590513 2313 ntBASIC18.48■□□□□ 0.55
NR1H4Q96RI1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 AC012313.1-201ENST00000593393 3059 ntBASIC18.48■□□□□ 0.55
NR1H4Q96RI1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NR1H4Q96RI1 AC099398.1-201ENST00000567919 2776 ntBASIC18.47■□□□□ 0.55
NR1H4Q96RI1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 AL356740.2-201ENST00000601559 647 ntBASIC18.47■□□□□ 0.55
NR1H4Q96RI1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NR1H4Q96RI1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms