Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP1S3Q96PC3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
AP1S3Q96PC3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
AP1S3Q96PC3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S3Q96PC3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 TCF3P1-201ENST00000423021 1937 ntBASIC14.82□□□□□ -0.04
AP1S3Q96PC3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 AL136116.3-201ENST00000402907 1138 ntBASIC14.82□□□□□ -0.04
AP1S3Q96PC3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 EEF1DP3-203ENST00000566025 782 ntBASIC14.82□□□□□ -0.04
AP1S3Q96PC3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 AC008175.2-201ENST00000612840 297 ntBASIC14.82□□□□□ -0.04
AP1S3Q96PC3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 AC020916.1-201ENST00000587762 1774 ntBASIC14.82□□□□□ -0.04
AP1S3Q96PC3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 TNXA-203ENST00000507684 2038 ntBASIC14.82□□□□□ -0.04
AP1S3Q96PC3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S3Q96PC3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 AC106820.2-201ENST00000563775 3264 ntBASIC14.81□□□□□ -0.04
AP1S3Q96PC3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.81□□□□□ -0.04
AP1S3Q96PC3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 AC061975.6-201ENST00000579045 1553 ntBASIC14.81□□□□□ -0.04
AP1S3Q96PC3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S3Q96PC3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms