Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 AC011558.1-201ENST00000623459 338 ntBASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NECTIN4Q96NY8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 AL023803.3-201ENST00000615559 522 ntBASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.41■□□□□ 0.86
NECTIN4Q96NY8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.4■□□□□ 0.86
NECTIN4Q96NY8 AL121603.2-201ENST00000557373 2117 ntBASIC20.39■□□□□ 0.86
NECTIN4Q96NY8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 AL450487.1-201ENST00000426799 995 ntBASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 AL353719.1-201ENST00000566847 864 ntBASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 AC140113.3-201ENST00000605663 199 ntBASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NECTIN4Q96NY8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN4Q96NY8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms