Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 SUDS3P1-201ENST00000505831 966 ntBASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 AC005837.3-201ENST00000612163 286 ntBASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP6Q96FZ7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 AC008175.2-201ENST00000612840 297 ntBASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHMP6Q96FZ7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP6Q96FZ7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP6Q96FZ7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CHMP6Q96FZ7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP6Q96FZ7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP6Q96FZ7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP6Q96FZ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP6Q96FZ7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms