Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 NUDT16P1-203ENST00000513809 620 ntBASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A1Q93050 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A1Q93050 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 AL157384.1-201ENST00000445995 2473 ntBASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
ATP6V0A1Q93050 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.02■■□□□ 1.11
ATP6V0A1Q93050 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 RCN1P1-201ENST00000400413 996 ntBASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 RBM17P1-201ENST00000453646 1190 ntBASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 REXO1L10P-201ENST00000615707 1290 ntBASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A1Q93050 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V0A1Q93050 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
ATP6V0A1Q93050 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 CR392000.1-201ENST00000624770 1228 ntBASIC22■■□□□ 1.11
ATP6V0A1Q93050 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
ATP6V0A1Q93050 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V0A1Q93050 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A1Q93050 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms