Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.21■□□□□ 0.35
USP9XQ93008 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.21■□□□□ 0.35
USP9XQ93008 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
USP9XQ93008 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.21■□□□□ 0.35
USP9XQ93008 STARP1-201ENST00000397973 869 ntBASIC17.21■□□□□ 0.35
USP9XQ93008 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
USP9XQ93008 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 SPDYE15P-201ENST00000424157 909 ntBASIC17.2■□□□□ 0.34
USP9XQ93008 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 SLC25A6P4-201ENST00000586535 553 ntBASIC17.2■□□□□ 0.34
USP9XQ93008 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
USP9XQ93008 FAM220CP-201ENST00000395253 831 ntBASIC17.2■□□□□ 0.34
USP9XQ93008 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.2■□□□□ 0.34
USP9XQ93008 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.2■□□□□ 0.34
USP9XQ93008 NEK4P2-201ENST00000580004 1012 ntBASIC17.2■□□□□ 0.34
USP9XQ93008 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
USP9XQ93008 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP9XQ93008 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP9XQ93008 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 AC018553.1-201ENST00000616682 1458 ntBASIC17.19■□□□□ 0.34
USP9XQ93008 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.19■□□□□ 0.34
USP9XQ93008 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 KRT18P13-201ENST00000400056 1290 ntBASIC17.19■□□□□ 0.34
USP9XQ93008 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.19■□□□□ 0.34
USP9XQ93008 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.19■□□□□ 0.34
USP9XQ93008 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
USP9XQ93008 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
USP9XQ93008 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.19■□□□□ 0.34
USP9XQ93008 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP9XQ93008 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 AP002383.4-201ENST00000442518 975 ntBASIC17.19■□□□□ 0.34
USP9XQ93008 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP9XQ93008 AL160237.2-201ENST00000556165 472 ntBASIC17.19■□□□□ 0.34
USP9XQ93008 ZNF444P1-201ENST00000559497 298 ntBASIC17.19■□□□□ 0.34
USP9XQ93008 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.19■□□□□ 0.34
USP9XQ93008 AL353719.1-201ENST00000566847 864 ntBASIC17.19■□□□□ 0.34
USP9XQ93008 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
USP9XQ93008 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP9XQ93008 TFP1-202ENST00000475455 1573 ntBASIC17.18■□□□□ 0.34
USP9XQ93008 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.18■□□□□ 0.34
USP9XQ93008 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 AC004870.1-201ENST00000315132 882 ntBASIC17.18■□□□□ 0.34
USP9XQ93008 PMS2P1-201ENST00000431037 1228 ntBASIC17.18■□□□□ 0.34
USP9XQ93008 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.18■□□□□ 0.34
USP9XQ93008 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP9XQ93008 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP9XQ93008 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
USP9XQ93008 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP9XQ93008 HBZP1-201ENST00000354915 429 ntBASIC17.18■□□□□ 0.34
USP9XQ93008 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP9XQ93008 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.18■□□□□ 0.34
USP9XQ93008 CA15P1-201ENST00000481698 905 ntBASIC17.18■□□□□ 0.34
USP9XQ93008 AC106795.1-205ENST00000512851 1056 ntBASIC17.18■□□□□ 0.34
USP9XQ93008 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP9XQ93008 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.17■□□□□ 0.34
USP9XQ93008 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.17■□□□□ 0.34
USP9XQ93008 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 HLA-G-202ENST00000376815 851 ntBASIC17.17■□□□□ 0.34
USP9XQ93008 HLA-G-203ENST00000376818 1127 ntBASIC17.17■□□□□ 0.34
USP9XQ93008 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.17■□□□□ 0.34
USP9XQ93008 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.17■□□□□ 0.34
USP9XQ93008 PRELID1P1-202ENST00000567272 903 ntBASIC17.17■□□□□ 0.34
USP9XQ93008 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.17■□□□□ 0.34
USP9XQ93008 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms