Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
AP3S1Q92572 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
AP3S1Q92572 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S1Q92572 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3S1Q92572 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S1Q92572 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
AP3S1Q92572 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3S1Q92572 MIR3621-201ENST00000580529 85 ntBASIC17.33■□□□□ 0.36
AP3S1Q92572 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3S1Q92572 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.33■□□□□ 0.36
AP3S1Q92572 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3S1Q92572 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S1Q92572 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP3S1Q92572 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
AP3S1Q92572 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
AP3S1Q92572 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.32■□□□□ 0.36
AP3S1Q92572 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3S1Q92572 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
AP3S1Q92572 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S1Q92572 AC090164.3-201ENST00000610780 2143 ntBASIC17.32■□□□□ 0.36
AP3S1Q92572 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP3S1Q92572 AC018470.1-201ENST00000624790 3129 ntBASIC17.32■□□□□ 0.36
AP3S1Q92572 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S1Q92572 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S1Q92572 PKD1P1-201ENST00000458669 6805 ntBASIC17.31■□□□□ 0.36
AP3S1Q92572 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
AP3S1Q92572 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
AP3S1Q92572 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S1Q92572 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S1Q92572 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3S1Q92572 FAM21FP-204ENST00000608637 956 ntBASIC17.31■□□□□ 0.36
AP3S1Q92572 AC120498.10-201ENST00000621827 505 ntBASIC17.31■□□□□ 0.36
AP3S1Q92572 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S1Q92572 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S1Q92572 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S1Q92572 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S1Q92572 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3S1Q92572 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
AP3S1Q92572 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3S1Q92572 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3S1Q92572 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3S1Q92572 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3S1Q92572 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
AP3S1Q92572 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
AP3S1Q92572 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms