Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP1Q8TDR0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP1Q8TDR0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP1Q8TDR0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAF3IP1Q8TDR0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 MIR4758-201ENST00000577688 71 ntBASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAF3IP1Q8TDR0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 AC091874.3-201ENST00000512672 1195 ntBASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAF3IP1Q8TDR0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 GUSBP6-202ENST00000438529 1198 ntBASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 TREX1-205ENST00000625293 1783 ntBASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAF3IP1Q8TDR0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAF3IP1Q8TDR0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms