Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 LINC01006-201ENST00000333319 2292 ntBASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 BX119927.1-201ENST00000636596 1552 ntBASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC9Q8TBE3 NBPF21P-201ENST00000425093 1451 ntBASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 AL391422.3-201ENST00000603791 2761 ntBASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC9Q8TBE3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 PHGDH-210ENST00000641115 1638 ntBASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC9Q8TBE3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AC116351.2-201ENST00000606540 1585 ntBASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 MIR718-201ENST00000390190 70 ntBASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AC018553.1-201ENST00000616682 1458 ntBASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC9Q8TBE3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
FNDC9Q8TBE3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms