Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK2A3Q8NEV1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 GPX1P1-201ENST00000388829 606 ntBASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 NCF1B-203ENST00000435988 1254 ntBASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 AC092666.2-201ENST00000613287 246 ntBASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 AC092118.2-201ENST00000613495 667 ntBASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK2A3Q8NEV1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 AC018445.3-201ENST00000624177 1945 ntBASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 AP001271.2-201ENST00000624018 1556 ntBASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK2A3Q8NEV1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 AL158211.5-201ENST00000623583 2518 ntBASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 AL390719.1-204ENST00000412397 1219 ntBASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 MIR4758-201ENST00000577688 71 ntBASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 AC009237.14-201ENST00000609975 1594 ntBASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK2A3Q8NEV1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK2A3Q8NEV1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.08■□□□□ 0.33
CSNK2A3Q8NEV1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK2A3Q8NEV1 AL020996.1-203ENST00000536896 2307 ntBASIC17.08■□□□□ 0.33
CSNK2A3Q8NEV1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK2A3Q8NEV1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.08■□□□□ 0.33
CSNK2A3Q8NEV1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms