Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.29■■□□□ 1.16
RETREG2Q8NC44 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 AC012306.2-201ENST00000609350 630 ntBASIC22.29■■□□□ 1.16
RETREG2Q8NC44 AL121829.2-201ENST00000620908 328 ntBASIC22.29■■□□□ 1.16
RETREG2Q8NC44 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RETREG2Q8NC44 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 AP003071.4-201ENST00000562276 1284 ntBASIC22.28■■□□□ 1.16
RETREG2Q8NC44 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG2Q8NC44 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 HLA-G-202ENST00000376815 851 ntBASIC22.27■■□□□ 1.16
RETREG2Q8NC44 HLA-G-203ENST00000376818 1127 ntBASIC22.27■■□□□ 1.16
RETREG2Q8NC44 RCN1P1-201ENST00000400413 996 ntBASIC22.27■■□□□ 1.16
RETREG2Q8NC44 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 HTR7P1-201ENST00000538670 1336 ntBASIC22.27■■□□□ 1.16
RETREG2Q8NC44 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
RETREG2Q8NC44 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RETREG2Q8NC44 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 MMP23A-201ENST00000234610 1017 ntBASIC22.26■■□□□ 1.15
RETREG2Q8NC44 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 AL353807.1-201ENST00000427475 662 ntBASIC22.26■■□□□ 1.15
RETREG2Q8NC44 KRT16P5-201ENST00000455284 522 ntBASIC22.26■■□□□ 1.15
RETREG2Q8NC44 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 AF186192.3-201ENST00000583427 947 ntBASIC22.26■■□□□ 1.15
RETREG2Q8NC44 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.26■■□□□ 1.15
RETREG2Q8NC44 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG2Q8NC44 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms