Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNEP1R1Q8N9A8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 AC073195.1-201ENST00000607241 877 ntBASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 AC026471.5-201ENST00000615068 467 ntBASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 AC073912.3-201ENST00000624414 853 ntBASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.47■□□□□ 0.39
CNEP1R1Q8N9A8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 BX119927.1-201ENST00000636596 1552 ntBASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNEP1R1Q8N9A8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CNEP1R1Q8N9A8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.46■□□□□ 0.38
CNEP1R1Q8N9A8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 YBX1P10-201ENST00000444752 975 ntBASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CNEP1R1Q8N9A8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNEP1R1Q8N9A8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms