Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18■□□□□ 0.47
LSMEM1Q8N8F7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 AC018553.1-201ENST00000616682 1458 ntBASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18■□□□□ 0.47
LSMEM1Q8N8F7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 AC093484.2-201ENST00000580996 2166 ntBASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSMEM1Q8N8F7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 MYC-209ENST00000641252 345 ntBASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSMEM1Q8N8F7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
LSMEM1Q8N8F7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms