Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 NBPF21P-201ENST00000425093 1451 ntBASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 PHGDH-210ENST00000641115 1638 ntBASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 AC008550.1-201ENST00000511500 884 ntBASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH20Q8N6Y1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH20Q8N6Y1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 AL512408.1-201ENST00000569378 2000 ntBASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH20Q8N6Y1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 AC018553.1-201ENST00000616682 1458 ntBASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 AL162377.1-201ENST00000618844 1793 ntBASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 MIR718-201ENST00000390190 70 ntBASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDH20Q8N6Y1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 TFP1-202ENST00000475455 1573 ntBASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 KRT16P5-201ENST00000455284 522 ntBASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
PCDH20Q8N6Y1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms