Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPSF7Q8N684 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.2■□□□□ 0.66
CPSF7Q8N684 LINC01465-201ENST00000408887 1940 ntBASIC19.19■□□□□ 0.66
CPSF7Q8N684 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 AC068338.2-201ENST00000563278 1430 ntBASIC19.19■□□□□ 0.66
CPSF7Q8N684 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 AL138781.2-201ENST00000617896 1843 ntBASIC19.19■□□□□ 0.66
CPSF7Q8N684 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 CYP2T1P-201ENST00000432607 1285 ntBASIC19.19■□□□□ 0.66
CPSF7Q8N684 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 AC133552.2-202ENST00000575694 574 ntBASIC19.19■□□□□ 0.66
CPSF7Q8N684 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.19■□□□□ 0.66
CPSF7Q8N684 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPSF7Q8N684 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 AL356652.1-201ENST00000615962 565 ntBASIC19.18■□□□□ 0.66
CPSF7Q8N684 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CPSF7Q8N684 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPSF7Q8N684 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 PGM5P4-201ENST00000421970 445 ntBASIC19.17■□□□□ 0.66
CPSF7Q8N684 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 AC007322.4-201ENST00000509611 723 ntBASIC19.17■□□□□ 0.66
CPSF7Q8N684 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPSF7Q8N684 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPSF7Q8N684 AC087633.2-202ENST00000565166 1439 ntBASIC19.17■□□□□ 0.66
CPSF7Q8N684 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CPSF7Q8N684 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPSF7Q8N684 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms