Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.16■□□□□ 0.82
SIX5Q8N196 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.16■□□□□ 0.82
SIX5Q8N196 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
SIX5Q8N196 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIX5Q8N196 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.15■□□□□ 0.82
SIX5Q8N196 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SIX5Q8N196 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.15■□□□□ 0.82
SIX5Q8N196 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.15■□□□□ 0.82
SIX5Q8N196 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.15■□□□□ 0.82
SIX5Q8N196 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.15■□□□□ 0.82
SIX5Q8N196 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.15■□□□□ 0.82
SIX5Q8N196 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SIX5Q8N196 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SIX5Q8N196 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SIX5Q8N196 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIX5Q8N196 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.15■□□□□ 0.82
SIX5Q8N196 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
SIX5Q8N196 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.14■□□□□ 0.81
SIX5Q8N196 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
SIX5Q8N196 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.14■□□□□ 0.81
SIX5Q8N196 AC011298.2-201ENST00000617989 482 ntBASIC20.14■□□□□ 0.81
SIX5Q8N196 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.14■□□□□ 0.81
SIX5Q8N196 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SIX5Q8N196 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SIX5Q8N196 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIX5Q8N196 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
SIX5Q8N196 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SIX5Q8N196 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.13■□□□□ 0.81
SIX5Q8N196 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SIX5Q8N196 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SIX5Q8N196 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SIX5Q8N196 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX5Q8N196 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 MFAP1P1-201ENST00000442257 1255 ntBASIC20.13■□□□□ 0.81
SIX5Q8N196 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX5Q8N196 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
SIX5Q8N196 AC011558.1-201ENST00000623459 338 ntBASIC20.13■□□□□ 0.81
SIX5Q8N196 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.13■□□□□ 0.81
SIX5Q8N196 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX5Q8N196 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.13■□□□□ 0.81
SIX5Q8N196 RCC2P6-201ENST00000526625 1557 ntBASIC20.12■□□□□ 0.81
SIX5Q8N196 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SIX5Q8N196 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SIX5Q8N196 KRT8P17-201ENST00000453110 1448 ntBASIC20.12■□□□□ 0.81
SIX5Q8N196 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX5Q8N196 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SIX5Q8N196 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
SIX5Q8N196 HCG4P8-203ENST00000443049 980 ntBASIC20.12■□□□□ 0.81
SIX5Q8N196 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX5Q8N196 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.12■□□□□ 0.81
SIX5Q8N196 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.12■□□□□ 0.81
SIX5Q8N196 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.12■□□□□ 0.81
SIX5Q8N196 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.12■□□□□ 0.81
SIX5Q8N196 AC141257.4-201ENST00000634557 245 ntBASIC20.12■□□□□ 0.81
SIX5Q8N196 AC136944.6-201ENST00000634818 245 ntBASIC20.12■□□□□ 0.81
SIX5Q8N196 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX5Q8N196 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX5Q8N196 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SIX5Q8N196 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX5Q8N196 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX5Q8N196 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX5Q8N196 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
SIX5Q8N196 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.11■□□□□ 0.81
SIX5Q8N196 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.11■□□□□ 0.81
SIX5Q8N196 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SIX5Q8N196 SLC25A1P2-201ENST00000430693 912 ntBASIC20.11■□□□□ 0.81
SIX5Q8N196 TUBB8P6-201ENST00000436895 1288 ntBASIC20.11■□□□□ 0.81
SIX5Q8N196 YBX1P10-201ENST00000444752 975 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms