Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC116Q8IYX3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 TREX1-205ENST00000625293 1783 ntBASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 SOX15-203ENST00000570788 1093 ntBASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 AC120498.8-201ENST00000614275 531 ntBASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC116Q8IYX3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC116Q8IYX3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC116Q8IYX3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC116Q8IYX3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC116Q8IYX3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC116Q8IYX3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC116Q8IYX3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC116Q8IYX3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 TFP1-202ENST00000475455 1573 ntBASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC116Q8IYX3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms