Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
CCDC146Q8IYE0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC146Q8IYE0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CCDC146Q8IYE0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC146Q8IYE0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 AC239809.2-201ENST00000415381 517 ntBASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 RPPH1-201ENST00000516869 333 ntBASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 TMEM191A-211ENST00000637163 1067 ntBASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC146Q8IYE0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC146Q8IYE0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC146Q8IYE0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 AL359736.2-201ENST00000621992 437 ntBASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 AP006587.1-201ENST00000534129 1502 ntBASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC146Q8IYE0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 AL158047.1-201ENST00000445918 881 ntBASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CCDC146Q8IYE0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 PRKY-204ENST00000533551 1019 ntBASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC146Q8IYE0 NBPF21P-201ENST00000425093 1451 ntBASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 GCSHP5-201ENST00000443090 522 ntBASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 AC142381.4-202ENST00000563973 229 ntBASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC146Q8IYE0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms