Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 AP001412.1-201ENST00000608405 714 ntBASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM48Q8IWZ4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 KRT16P5-201ENST00000455284 522 ntBASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 Z99916.2-201ENST00000604037 246 ntBASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM48Q8IWZ4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 AC073314.1-201ENST00000568729 2216 ntBASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 AC012618.2-201ENST00000428058 849 ntBASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 RARRES2P10-201ENST00000564312 460 ntBASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM48Q8IWZ4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM48Q8IWZ4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM48Q8IWZ4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 AP006587.1-201ENST00000534129 1502 ntBASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 PHGDH-210ENST00000641115 1638 ntBASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 RPS2P55-201ENST00000397318 883 ntBASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 AL596275.1-201ENST00000423464 877 ntBASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 AC107956.1-201ENST00000494359 873 ntBASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM48Q8IWZ4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM48Q8IWZ4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms