Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 MIR4758-201ENST00000577688 71 ntBASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL3Q8IVW4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
CDKL3Q8IVW4 AC005332.7-201ENST00000614046 2005 ntBASIC20.2■□□□□ 0.83
CDKL3Q8IVW4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKL3Q8IVW4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKL3Q8IVW4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDKL3Q8IVW4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 TFP1-202ENST00000475455 1573 ntBASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AC097658.1-201ENST00000475555 843 ntBASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AC006557.6-201ENST00000623071 864 ntBASIC20.17■□□□□ 0.82
CDKL3Q8IVW4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms