Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC009237.3-201ENST00000393279 1427 ntBASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.81■□□□□ 0.44
CROCCP3Q8IVE0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
CROCCP3Q8IVE0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 AL138724.1-201ENST00000606771 1088 ntBASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.79■□□□□ 0.44
CROCCP3Q8IVE0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 AC011270.2-201ENST00000624293 2550 ntBASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CROCCP3Q8IVE0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms