Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 SMG8-203ENST00000578922 2178 ntBASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 CCR12P-201ENST00000446203 998 ntBASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPAS4Q8IUM7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPAS4Q8IUM7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPAS4Q8IUM7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
NPAS4Q8IUM7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 LINC01238-205ENST00000567549 1107 ntBASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NPAS4Q8IUM7 LINC00565-201ENST00000562710 2331 ntBASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 SLC25A1P2-201ENST00000430693 912 ntBASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 AC063952.2-201ENST00000498792 1227 ntBASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 AC022616.7-201ENST00000525383 220 ntBASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAS4Q8IUM7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 AC091390.4-202ENST00000476426 537 ntBASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 KRT8P8-201ENST00000434750 1448 ntBASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAS4Q8IUM7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 AC117947.1-201ENST00000427448 529 ntBASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 Z85996.1-201ENST00000494644 937 ntBASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
NPAS4Q8IUM7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms