Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 AC011506.1-201ENST00000474329 610 ntBASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.2□□□□□ -0.46
VPS13BQ7Z7G8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 FP700111.2-201ENST00000619190 1892 ntBASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 C2orf69P3-201ENST00000565542 1120 ntBASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VPS13BQ7Z7G8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 KRT8P17-201ENST00000453110 1448 ntBASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 AC004980.1-204ENST00000429707 299 ntBASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 AC246785.2-201ENST00000432512 513 ntBASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 AC128688.1-201ENST00000487626 519 ntBASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.18□□□□□ -0.46
VPS13BQ7Z7G8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.17□□□□□ -0.46
VPS13BQ7Z7G8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms