Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 AC009237.14-201ENST00000609975 1594 ntBASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD3Q7Z3D4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.77■□□□□ 0.75
LYSMD3Q7Z3D4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.77■□□□□ 0.75
LYSMD3Q7Z3D4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LYSMD3Q7Z3D4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 TMEM179-206ENST00000616017 1645 ntBASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD3Q7Z3D4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD3Q7Z3D4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 RN7SL471P-201ENST00000580476 299 ntBASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 AL023875.1-201ENST00000640777 796 ntBASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD3Q7Z3D4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 PRKY-204ENST00000533551 1019 ntBASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD3Q7Z3D4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms