Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 AL158047.1-201ENST00000445918 881 ntBASIC18.41■□□□□ 0.54
RTL4Q6ZR62 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL4Q6ZR62 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 AC233263.1-201ENST00000578059 224 ntBASIC18.4■□□□□ 0.54
RTL4Q6ZR62 RN7SL471P-201ENST00000580476 299 ntBASIC18.4■□□□□ 0.54
RTL4Q6ZR62 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL4Q6ZR62 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTL4Q6ZR62 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTL4Q6ZR62 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTL4Q6ZR62 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 AFG3L1P-217ENST00000557444 2447 ntBASIC18.39■□□□□ 0.53
RTL4Q6ZR62 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 RPS2P52-201ENST00000469610 820 ntBASIC18.39■□□□□ 0.53
RTL4Q6ZR62 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 C1QBPP2-201ENST00000528754 825 ntBASIC18.39■□□□□ 0.53
RTL4Q6ZR62 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 AL031963.3-201ENST00000606441 850 ntBASIC18.39■□□□□ 0.53
RTL4Q6ZR62 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 KRT8P20-201ENST00000423953 1409 ntBASIC18.39■□□□□ 0.53
RTL4Q6ZR62 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL4Q6ZR62 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 PTBP1P-201ENST00000554374 1601 ntBASIC18.38■□□□□ 0.53
RTL4Q6ZR62 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 AC066615.1-201ENST00000640911 628 ntBASIC18.38■□□□□ 0.53
RTL4Q6ZR62 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL4Q6ZR62 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTL4Q6ZR62 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms