Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 HLA-G-202ENST00000376815 851 ntBASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 HLA-G-203ENST00000376818 1127 ntBASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 AC098934.4-201ENST00000564127 592 ntBASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 MYC-209ENST00000641252 345 ntBASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN4Q6PJG9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 AC073210.2-201ENST00000430369 194 ntBASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 AC097658.1-201ENST00000475555 843 ntBASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 AC142086.2-201ENST00000569753 217 ntBASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRFN4Q6PJG9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 HLA-L-209ENST00000420110 1011 ntBASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
LRFN4Q6PJG9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 KRT16P6-202ENST00000425692 1426 ntBASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
LRFN4Q6PJG9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
LRFN4Q6PJG9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN4Q6PJG9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRFN4Q6PJG9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN4Q6PJG9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LRFN4Q6PJG9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms