Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASC4Q6P4E1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 PHGDH-210ENST00000641115 1638 ntBASIC20.02■□□□□ 0.8
CASC4Q6P4E1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 AC073111.5-205ENST00000641717 521 ntBASIC20.02■□□□□ 0.8
CASC4Q6P4E1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
CASC4Q6P4E1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CASC4Q6P4E1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.02■□□□□ 0.79
CASC4Q6P4E1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.02■□□□□ 0.79
CASC4Q6P4E1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CASC4Q6P4E1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 AC023632.3-201ENST00000521633 145 ntBASIC20.01■□□□□ 0.79
CASC4Q6P4E1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 AC092437.1-201ENST00000624794 1048 ntBASIC20.01■□□□□ 0.79
CASC4Q6P4E1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 MKRN4P-201ENST00000444706 1521 ntBASIC20.01■□□□□ 0.79
CASC4Q6P4E1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.01■□□□□ 0.79
CASC4Q6P4E1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 AC105036.2-201ENST00000569468 176 ntBASIC20■□□□□ 0.79
CASC4Q6P4E1 AC133552.2-202ENST00000575694 574 ntBASIC20■□□□□ 0.79
CASC4Q6P4E1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20■□□□□ 0.79
CASC4Q6P4E1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20■□□□□ 0.79
CASC4Q6P4E1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20■□□□□ 0.79
CASC4Q6P4E1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 AL137784.2-201ENST00000607332 1000 ntBASIC20■□□□□ 0.79
CASC4Q6P4E1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20■□□□□ 0.79
CASC4Q6P4E1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20■□□□□ 0.79
CASC4Q6P4E1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CASC4Q6P4E1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20■□□□□ 0.79
CASC4Q6P4E1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CASC4Q6P4E1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 AC005332.7-201ENST00000614046 2005 ntBASIC20■□□□□ 0.79
CASC4Q6P4E1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20■□□□□ 0.79
CASC4Q6P4E1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASC4Q6P4E1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20■□□□□ 0.79
CASC4Q6P4E1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASC4Q6P4E1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms