Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.89■□□□□ 0.45
NIPAL3Q6P499 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 AC069152.1-201ENST00000438030 544 ntBASIC17.88■□□□□ 0.45
NIPAL3Q6P499 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 AC142086.2-201ENST00000569753 217 ntBASIC17.88■□□□□ 0.45
NIPAL3Q6P499 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NIPAL3Q6P499 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 AC009237.14-201ENST00000609975 1594 ntBASIC17.87■□□□□ 0.45
NIPAL3Q6P499 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NIPAL3Q6P499 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 PTBP1P-201ENST00000554374 1601 ntBASIC17.86■□□□□ 0.45
NIPAL3Q6P499 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NIPAL3Q6P499 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NIPAL3Q6P499 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms