Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 AL390719.1-204ENST00000412397 1219 ntBASIC20.62■□□□□ 0.89
RNF43Q68DV7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 AC112907.3-201ENST00000577781 2400 ntBASIC20.62■□□□□ 0.89
RNF43Q68DV7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF43Q68DV7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF43Q68DV7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF43Q68DV7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF43Q68DV7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF43Q68DV7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF43Q68DV7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF43Q68DV7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 AC133681.1-201ENST00000465482 601 ntBASIC20.6■□□□□ 0.89
RNF43Q68DV7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RNF43Q68DV7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF43Q68DV7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 FP700111.2-201ENST00000619190 1892 ntBASIC20.59■□□□□ 0.89
RNF43Q68DV7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 BX088651.1-201ENST00000540551 451 ntBASIC20.59■□□□□ 0.89
RNF43Q68DV7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF43Q68DV7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF43Q68DV7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RNF43Q68DV7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF43Q68DV7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms