Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQA1Q5Y7H0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC116351.2-201ENST00000606540 1585 ntBASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 AP001271.2-201ENST00000624018 1556 ntBASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC018553.1-201ENST00000616682 1458 ntBASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQA1Q5Y7H0 AL691432.2-201ENST00000607222 2038 ntBASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA1Q5Y7H0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA1Q5Y7H0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 AC112907.3-201ENST00000577781 2400 ntBASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DQA1Q5Y7H0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms