Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIF1Q5T3J3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIF1Q5T3J3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 AL512625.2-201ENST00000417533 625 ntBASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 BID-214ENST00000617586 542 ntTSL 5 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 KRT17P1-201ENST00000399211 1546 ntBASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.53■□□□□ 0.56
LRIF1Q5T3J3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 AC116351.2-201ENST00000606540 1585 ntBASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 AC007322.1-201ENST00000426983 750 ntBASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIF1Q5T3J3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRIF1Q5T3J3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIF1Q5T3J3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRIF1Q5T3J3 AC018553.1-201ENST00000616682 1458 ntBASIC18.52■□□□□ 0.55
LRIF1Q5T3J3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIF1Q5T3J3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIF1Q5T3J3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms